Contributions to Zoology, 86 (3) – 2017José A. Jurado-Rivera; Genaro Álvarez; José A. Caro; Carlos Juan; Joan Pons; Damià Jaume: Molecular systematics of Haploginglymus, a genus of subterranean amphipods endemic to the Iberian Peninsula (Amphipoda: Niphargidae)

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Online Supplementary Information

S1. List of all taxa included in the analyses with their respective geographical origin, voucher ID and GenBank accession codes. http://www.ctoz.nl/c/ctz/supp/Supplementary_Table_S1.pdf

S2. Maximum likelihood phylogenetic tree based on the analysis of the cox1 alignment. Node numbers represent statistical bootstrap support (only values ≥ 70 are shown). Tip labels refer to the species names and their respective GenBank accession codes. http://www.ctoz.nl/c/ctz/supp/Supplementary_Figure_S2.pdf

S3. Maximum likelihood phylogenetic tree based on the analysis of the H3 alignment. Node numbers represent statistical bootstrap support (only values ≥ 70 are shown). Tip labels refer to the species names and their respective GenBank accession codes. http://www.ctoz.nl/c/ctz/supp/Supplementary_Figure_S3.pdf

S4. Maximum likelihood phylogenetic tree based on the analysis of the LSU alignment. Node numbers represent statistical bootstrap support (only values ≥ 70 are shown). Tip labels refer to the species names and their respective GenBank accession codes. http://www.ctoz.nl/c/ctz/supp/Supplementary_Figure_S4.pdf

S5. Maximum likelihood phylogenetic tree based on the combined analysis of cox1, H3 and LSU. Node numbers represent statistical bootstrap support (only values ≥ 70 are shown). http://www.ctoz.nl/c/ctz/supp/Supplementary_Figure_S5.pdf

S6. Bayesian phylogenetic tree based on the combined analysis of cox1, H3 and LSU. Node numbers represent posterior probabilities (only values ≥ 0.70 are shown). http://www.ctoz.nl/c/ctz/supp/Supplementary_Figure_S6.pdf

S7. Maximum likelihood phylogenetic tree based on the combined analysis of cox1 (excluding third coding positions), H3 and LSU. Node numbers represent statistical bootstrap support (only values ≥ 70 are shown). http://www.ctoz.nl/c/ctz/supp/Supplementary_Figure_S7.pdf

S8. Maximum likelihood phylogenetic tree based on the analysis of the reduced LSU alignment (ambiguosly aligned positions removed with Gblocks). Node numbers represent statistical bootstrap support (only values ≥ 70 are shown). http://www.ctoz.nl/c/ctz/supp/Supplementary_Figure_S8.pdf